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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs3827393 chr22:45736153 A/G FAM118A chr22:45704849-45737836:+ 0.9 6.58 2.32E-8 Box Plot
ACC rs3829247 chr11:60138201 A/G MS4A14 chr11:60146003-60185229:+ 0.35 5.2 3.46E-6 Box Plot
ACC rs3840451 chr1:235491823 C/CG RBM34 chr1:235294498-235324772:- 0.69 5.09 5.06E-6 Box Plot
ACC rs3842058 chr5:96272528 CAA/C ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs3846968 chr7:64733634 G/C INTS4L1 chr7:64601603-64694600:+ 0.65 5.08 5.18E-6 Box Plot
ACC rs3846969 chr7:64733683 G/A INTS4L1 chr7:64601603-64694600:+ 0.65 5.08 5.18E-6 Box Plot
ACC rs3851062 chr10:75698121 G/T CHCHD1 chr10:75541805-75543410:+ 0.96 5.47 1.3E-6 Box Plot
ACC rs385575 chr20:44366233 T/A WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs3857675 chr7:64730604 G/A INTS4L1 chr7:64601603-64694600:+ 0.64 5.08 5.21E-6 Box Plot
ACC rs3864395 chr7:64543900 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs3890167 chr12:8394377 A/G LOC653113 chr12:8383646-8395542:- 0.93 6.45 3.73E-8 Box Plot
ACC rs390386 chr20:44438974 G/T WFDC3 chr20:44376583-44420571:- 0.93 6.58 2.34E-8 Box Plot
ACC rs392245 chr20:44364488 A/C WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs3930253 chr9:98753038 C/T C9orf130 chr9:98568372-98638259:- 0.55 5.07 5.36E-6 Box Plot
ACC rs394561 chr20:44359953 G/A WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot